[Annoyance] Thread still present after leaving balsa

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[Annoyance] Thread still present after leaving balsa

by Jean-Luc Coulon (f5ibh)-2 :: Rate this Message:

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Hi,

When I leave balsa (File > Quit), there is always a thread present.
I need to kill it manually to be able to start balsa again.

When I launch balsa in gdb, I get:


----->8----->8----->8----->8----->8------
...
....
Thread 0x7fffdaffd950 (LWP 10579) exited]
[New Thread 0x7fffdaffd950 (LWP 10580)]
[Thread 0x7fffdaffd950 (LWP 10580) exited]
Mail check thread cancelled. I know it is rough.

----->8----->8----->8----->8----->8------

If I attached the running process to strace, I get this:
[jean-luc@tangerine] % strace -fp 14529
Process 14537 attached with 2 threads - interrupt to quit
[pid 14537] futex(0x1d79150, FUTEX_WAIT_PRIVATE, 2, NULL
<unfinished ...>
[pid 14529] futex(0x1d79150, FUTEX_WAIT_PRIVATE, 2, NULL


And it stays endless in this state.

I use lateste git version, built with the following configure options
and X86_64 architecture:

          --enable-smime \
         --with-compface \
         --with-gpgme \
         --with-gss \
         --with-gtkspell \
         --with-ldap \
         --with-sqlite \
         --with-ssl \
         --with-gtksourceview=2 \
         --enable-extra-mimeicons \
         --with-libnotify \
         --with-rubrica \
         --enable-threads \
         --with-unique \
         --with-webkit


Regards

Jean-Luc



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Re: [Annoyance] Thread still present after leaving balsa

by Pawel Salek-4 :: Rate this Message:

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On 07/31/2009 10:58:08 AM, Jean-Luc Coulon (f5ibh) wrote:

> Hi,
>
> When I leave balsa (File > Quit), there is always a thread present.
> I need to kill it manually to be able to start balsa again.
>
> When I launch balsa in gdb, I get:
>
>
> ----->8----->8----->8----->8----->8------
> ...
> ....
> Thread 0x7fffdaffd950 (LWP 10579) exited]
> [New Thread 0x7fffdaffd950 (LWP 10580)]
> [Thread 0x7fffdaffd950 (LWP 10580) exited]
> Mail check thread cancelled. I know it is rough.
>

Can you please press Ctrl-C and then type at gdb prompt:

thread apply all where

This will help us find out which thread lingers...

Pawel
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Re: [Annoyance] Thread still present after leaving balsa

by Jean-Luc Coulon (f5ibh)-2 :: Rate this Message:

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Hi Pawel,

>Can you please press Ctrl-C and then type at gdb prompt:
>
>thread apply all where
>
>This will help us find out which thread lingers...

I got a segfault and then the previous message.
I've what you asked and you can find attached the gdb report.

Regards

Jean-Luc



Program received signal SIGSEGV, Segmentation fault.
0x00007fffee986ad0 in ?? () from /lib/libc.so.6
(gdb) bt
#0  0x00007fffee986ad0 in ?? () from /lib/libc.so.6
#1  0x00007fffee988da8 in malloc () from /lib/libc.so.6
#2  0x00007fffe823df7c in ?? () from /usr/lib/libxcb.so.1
#3  0x00007fffe823c9a9 in ?? () from /usr/lib/libxcb.so.1
#4  0x00007fffe823e91c in xcb_wait_for_reply () from /usr/lib/libxcb.so.1
#5  0x00007fffee4235c4 in _XReply () from /usr/lib/libX11.so.6
#6  0x00007fffee417a03 in XSync () from /usr/lib/libX11.so.6
#7  0x00007ffff115d96e in gdk_flush () from /usr/lib/libgdk-x11-2.0.so.0
#8  0x00007ffff14e3bad in gtk_main () from /usr/lib/libgtk-x11-2.0.so.0
#9  0x000000000045bf05 in main (argc=<value optimized out>,
    argv=0x7fffffffe498) at main.c:1149
(gdb)


------->8--------------->8--------------->8---------------->8---------------


Thread 0x7fffdbfff950 (LWP 28686) exited]
Mail check thread cancelled. I know it is rough.

Program received signal SIGSEGV, Segmentation fault.
0x00007fffee9847dc in ?? () from /lib/libc.so.6
(gdb) thread apply all where

Thread 2 (Thread 0x7fffe1b67950 (LWP 28674)):
#0  0x00007fffee9d6d36 in poll () from /lib/libc.so.6
#1  0x00000000004de914 in bnio_poll (sio=0x7fffdc001860,
    want_read=<value optimized out>, want_write=<value optimized out>, fast=0)
    at siobuf.c:301
#2  0x00000000004deb0a in raw_read (sio=0x7fffdc001860) at siobuf.c:522
#3  bnio_fill (sio=0x7fffdc001860) at siobuf.c:560
#4  0x00000000004dee26 in bnio_read (sio=0x7fffe1b66db0,
    bufp=<value optimized out>, buflen=60000) at siobuf.c:592
#5  0x00000000004dee53 in bnio_getc (sio=0x7fffe1b66db0) at siobuf.c:618
#6  0x00000000004d6331 in imap_cmd_get_tag (handle=0xbec000, lastcmd=7)
    at imap-handle.c:885
#7  imap_cmd_step (handle=0xbec000, lastcmd=7) at imap-handle.c:2002
#8  0x00000000004d6c8c in imap_cmd_exec_cmdno (handle=0xbec000,
    cmd=0x7fffdc081c70 "LIST \"Trash\" \"%\"", ret_cmdno=0x0)
    at imap-handle.c:2087
#9  0x00000000004d16d9 in imap_mbox_list (handle=0xbec000,
    what=<value optimized out>) at imap-commands.c:326
#10 0x00000000004abc77 in lbm_imap_check (mailbox=0x8e67e0)
    at mailbox_imap.c:1246
#11 libbalsa_mailbox_imap_check (mailbox=0x8e67e0) at mailbox_imap.c:1262
#12 0x00000000004a3d9e in libbalsa_mailbox_check (mailbox=0x8e67e0)
---Type <return> to continue, or q <return> to quit---
    at mailbox.c:719
#13 0x000000000045695f in bw_mailbox_check (mailbox=0x8e67e0)
    at main-window.c:2951
#14 0x00007fffef32ea4d in g_slist_foreach () from /usr/lib/libglib-2.0.so.0
#15 0x0000000000456787 in bw_check_messages_thread (list=0xbb63a0)
    at main-window.c:2969
#16 0x00007ffff3d1df9a in start_thread () from /lib/libpthread.so.0
#17 0x00007fffee9df56d in clone () from /lib/libc.so.6
#18 0x0000000000000000 in ?? ()

Thread 1 (Thread 0x7ffff7e987f0 (LWP 28666)):
#0  0x00007fffee9847dc in ?? () from /lib/libc.so.6
#1  0x00007fffee9870ee in ?? () from /lib/libc.so.6
#2  0x00007fffee988da8 in malloc () from /lib/libc.so.6
#3  0x00007fffef31848e in g_realloc () from /usr/lib/libglib-2.0.so.0
#4  0x00007fffef332464 in ?? () from /usr/lib/libglib-2.0.so.0
#5  0x00007fffef3335ea in g_string_sized_new () from /usr/lib/libglib-2.0.so.0
#6  0x00007fffef308665 in ?? () from /usr/lib/libglib-2.0.so.0
#7  0x00007fffef309fd9 in ?? () from /usr/lib/libglib-2.0.so.0
#8  0x00007fffef30a178 in g_key_file_set_comment ()
   from /usr/lib/libglib-2.0.so.0
#9  0x000000000049ae97 in lbc_sync (conf=0x7262a0) at libbalsa-conf.c:485
#10 0x000000000049af33 in libbalsa_conf_sync () at libbalsa-conf.c:522
---Type <return> to continue, or q <return> to quit---
#11 0x00007fffef30da9d in g_list_foreach () from /usr/lib/libglib-2.0.so.0
#12 0x0000000000467307 in config_address_books_save () at save-restore.c:1581
#13 config_save () at save-restore.c:1183
#14 0x000000000042b00e in balsa_app_destroy () at balsa-app.c:445
#15 0x000000000045bf4f in balsa_cleanup (argc=<value optimized out>,
    argv=0x7fffffffe498) at main.c:1203
#16 main (argc=<value optimized out>, argv=0x7fffffffe498) at main.c:1152
(gdb)




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Re: [Annoyance] Thread still present after leaving balsa

by Pawel Salek-4 :: Rate this Message:

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On 07/31/2009 07:03:23 PM, Jean-Luc Coulon (f5ibh) wrote:
> [cut]
------quoted attachment "balsa-gdb-session"------

>
>
> Program received signal SIGSEGV, Segmentation fault.
> 0x00007fffee986ad0 in ?? () from /lib/libc.so.6
> (gdb) bt
> #0  0x00007fffee986ad0 in ?? () from /lib/libc.so.6
> #1  0x00007fffee988da8 in malloc () from /lib/libc.so.6
> #2  0x00007fffe823df7c in ?? () from /usr/lib/libxcb.so.1
> #3  0x00007fffe823c9a9 in ?? () from /usr/lib/libxcb.so.1
> #4  0x00007fffe823e91c in xcb_wait_for_reply () from  
> /usr/lib/libxcb.so.1
> #5  0x00007fffee4235c4 in _XReply () from /usr/lib/libX11.so.6
> #6  0x00007fffee417a03 in XSync () from /usr/lib/libX11.so.6
> #7  0x00007ffff115d96e in gdk_flush () from  
> /usr/lib/libgdk-x11-2.0.so.0
> #8  0x00007ffff14e3bad in gtk_main () from  
> /usr/lib/libgtk-x11-2.0.so.0

This is the (in)fameous xcb deadlock problem - or can it be a heap  
corruption? One way to find out is to run either:

env MALLOC_CHECK_=2 balsa
or using valgrind.

> Thread 2 (Thread 0x7fffe1b67950 (LWP 28674)):
> #0  0x00007fffee9d6d36 in poll () from /lib/libc.so.6
> #1  0x00000000004de914 in bnio_poll (sio=0x7fffdc001860,
>     want_read=<value optimized out>, want_write=<value optimized  
> out>, fast=0)
>     at siobuf.c:301
> #2  0x00000000004deb0a in raw_read (sio=0x7fffdc001860) at  
> siobuf.c:522
> #3  bnio_fill (sio=0x7fffdc001860) at siobuf.c:560
> #4  0x00000000004dee26 in bnio_read (sio=0x7fffe1b66db0,
>     bufp=<value optimized out>, buflen=60000) at siobuf.c:592
> #5  0x00000000004dee53 in bnio_getc (sio=0x7fffe1b66db0) at  
> siobuf.c:618
> #6  0x00000000004d6331 in imap_cmd_get_tag (handle=0xbec000,  
> lastcmd=7)
>     at imap-handle.c:885
> #7  imap_cmd_step (handle=0xbec000, lastcmd=7) at imap-handle.c:2002
> #8  0x00000000004d6c8c in imap_cmd_exec_cmdno (handle=0xbec000,
>     cmd=0x7fffdc081c70 "LIST \"Trash\" \"%\"", ret_cmdno=0x0)
>     at imap-handle.c:2087
> #9  0x00000000004d16d9 in imap_mbox_list (handle=0xbec000,
>     what=<value optimized out>) at imap-commands.c:326

I have recently added a thread lock protecting LIST execution - this is  
meant specifically to prevent protocol errors in LIST. Are you running  
with or without that change?

>
> Thread 1 (Thread 0x7ffff7e987f0 (LWP 28666)):
> #0  0x00007fffee9847dc in ?? () from /lib/libc.so.6
> #1  0x00007fffee9870ee in ?? () from /lib/libc.so.6
> #2  0x00007fffee988da8 in malloc () from /lib/libc.so.6
> #3  0x00007fffef31848e in g_realloc () from /usr/lib/libglib-2.0.so.0
> #4  0x00007fffef332464 in ?? () from /usr/lib/libglib-2.0.so.0
> #5  0x00007fffef3335ea in g_string_sized_new () from  
> /usr/lib/libglib-2.0.so.0
> #6  0x00007fffef308665 in ?? () from /usr/lib/libglib-2.0.so.0
> #7  0x00007fffef309fd9 in ?? () from /usr/lib/libglib-2.0.so.0
> #8  0x00007fffef30a178 in g_key_file_set_comment ()
>    from /usr/lib/libglib-2.0.so.0
> #9  0x000000000049ae97 in lbc_sync (conf=0x7262a0) at  
> libbalsa-conf.c:485
> #10 0x000000000049af33 in libbalsa_conf_sync () at libbalsa-conf.c:522
> ---Type <return> to continue, or q <return> to quit---
> #11 0x00007fffef30da9d in g_list_foreach () from  
> /usr/lib/libglib-2.0.so.0
> #12 0x0000000000467307 in config_address_books_save () at  
> save-restore.c:1581
> #13 config_save () at save-restore.c:1183
> #14 0x000000000042b00e in balsa_app_destroy () at balsa-app.c:445
> #15 0x000000000045bf4f in balsa_cleanup (argc=<value optimized out>,
>     argv=0x7fffffffe498) at main.c:1203
> #16 main (argc=<value optimized out>, argv=0x7fffffffe498) at  
> main.c:1152
> (gdb)

I have never seen a trace like this. The fact that malloc is involved  
makes me think it may be thread corruption after all...

Pawel
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Parent Message unknown Re: [Annoyance] Thread still present after leaving balsa

by Jean-Luc Coulon (f5ibh)-2 :: Rate this Message:

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Le 01/08/2009 20:58:25, Pawel Salek a écrit :

>glibc will run on balsa's behalf extra heap consistency checks and
> will >abort when it encounters one.
>
>one can alternatively run >gdb /path/to/balsa set env MALLOC_CHECK_ 2
>run and gdb will notice the abort and prompt the user.

I was running balsa all the day with MALOC_CHECK_ 2.

I was away, the machine about idle, I find balsa crashed when
I went back this evening:

Program received signal SIGPIPE, Broken pipe.
[Switching to Thread 0x7fffe1bf3950 (LWP 10902)]
0x00007ffff3d2452b in write () from /lib/libpthread.so.0

I did "bt" then "thread apply all where" on the gdb session.

You wull find attached the gdb session.

Regards

Jean-Luc

[New Thread 0x7fffe1bf3950 (LWP 10770)]
[Thread 0x7fffe1bf3950 (LWP 10770) exited]
[New Thread 0x7fffe1bf3950 (LWP 10771)]
[Thread 0x7fffe1bf3950 (LWP 10771) exited]
[New Thread 0x7fffe1bf3950 (LWP 10772)]
[Thread 0x7fffe1bf3950 (LWP 10772) exited]
^[[5~^[[5~[New Thread 0x7fffe1bf3950 (LWP 10788)]
[Thread 0x7fffe1bf3950 (LWP 10788) exited]
[New Thread 0x7fffe1bf3950 (LWP 10789)]
[Thread 0x7fffe1bf3950 (LWP 10789) exited]
[New Thread 0x7fffe1bf3950 (LWP 10807)]
[Thread 0x7fffe1bf3950 (LWP 10807) exited]
[New Thread 0x7fffe1bf3950 (LWP 10808)]
[Thread 0x7fffe1bf3950 (LWP 10808) exited]
[New Thread 0x7fffe1bf3950 (LWP 10901)]
[Thread 0x7fffe1bf3950 (LWP 10901) exited]
[New Thread 0x7fffe1bf3950 (LWP 10902)]

Program received signal SIGPIPE, Broken pipe.
[Switching to Thread 0x7fffe1bf3950 (LWP 10902)]
0x00007ffff3d2452b in write () from /lib/libpthread.so.0

-------------------

(gdb) bt
#0  0x00007ffff3d2452b in write () from /lib/libpthread.so.0
#1  0x00007ffff2dff947 in ?? () from /usr/lib/libcrypto.so.0.9.8
#2  0x00007ffff2dfd9be in BIO_write () from /usr/lib/libcrypto.so.0.9.8
#3  0x00007ffff30f5044 in ssl3_write_pending () from /usr/lib/libssl.so.0.9.8
#4  0x00007ffff30f5553 in ssl3_dispatch_alert () from /usr/lib/libssl.so.0.9.8
#5  0x00007ffff30f288a in ssl3_shutdown () from /usr/lib/libssl.so.0.9.8
#6  0x00000000004df54c in bnio_detach (sio=0xc3da70) at siobuf.c:148
#7  0x00000000004d6137 in imap_handle_disconnect (h=0xb79000)
    at imap-handle.c:558
#8  0x00000000004d6b17 in imap_timeout_cb (arg=0xb79000) at imap-handle.c:735
#9  0x00000000004dea3b in sio_sslpoll (sio=0xc3da70, ret=<value optimized out>)
    at siobuf.c:341
#10 0x00000000004deb0a in raw_read (sio=0xc3da70) at siobuf.c:522
#11 bnio_fill (sio=0xc3da70) at siobuf.c:560
#12 0x00000000004dee26 in bnio_read (sio=0x17, bufp=<value optimized out>,
    buflen=37) at siobuf.c:592
#13 0x00000000004dee53 in bnio_getc (sio=0x17) at siobuf.c:618
#14 0x00000000004d6331 in imap_cmd_get_tag (handle=0xb79000, lastcmd=388)
    at imap-handle.c:885
#15 imap_cmd_step (handle=0xb79000, lastcmd=388) at imap-handle.c:2002
#16 0x00000000004d6c8c in imap_cmd_exec_cmdno (handle=0xb79000,
    cmd=0xfb9080 "LIST \"Trash\" \"%\"", ret_cmdno=0x0) at imap-handle.c:2087
#17 0x00000000004d16d9 in imap_mbox_list (handle=0xb79000,
    what=<value optimized out>) at imap-commands.c:326
#18 0x00000000004abc77 in lbm_imap_check (mailbox=0xa827e0)
    at mailbox_imap.c:1246
#19 libbalsa_mailbox_imap_check (mailbox=0xa827e0) at mailbox_imap.c:1262
#20 0x00000000004a3d9e in libbalsa_mailbox_check (mailbox=0xa827e0)
    at mailbox.c:719
#21 0x000000000045695f in bw_mailbox_check (mailbox=0xa827e0)
    at main-window.c:2951
#22 0x00007fffef32ea4d in g_slist_foreach () from /usr/lib/libglib-2.0.so.0
#23 0x0000000000456787 in bw_check_messages_thread (list=0xf26e00)
    at main-window.c:2969
#24 0x00007ffff3d1df9a in start_thread () from /lib/libpthread.so.0
#25 0x00007fffee9df56d in clone () from /lib/libc.so.6
#26 0x0000000000000000 in ?? ()


-------------------------

(gdb) thread apply all where
Thread 525 (Thread 0x7fffe1bf3950 (LWP 10902)):
#0  0x00007ffff3d2452b in write () from /lib/libpthread.so.0
#1  0x00007ffff2dff947 in ?? () from /usr/lib/libcrypto.so.0.9.8
#2  0x00007ffff2dfd9be in BIO_write () from /usr/lib/libcrypto.so.0.9.8
#3  0x00007ffff30f5044 in ssl3_write_pending () from /usr/lib/libssl.so.0.9.8
#4  0x00007ffff30f5553 in ssl3_dispatch_alert () from /usr/lib/libssl.so.0.9.8
#5  0x00007ffff30f288a in ssl3_shutdown () from /usr/lib/libssl.so.0.9.8
#6  0x00000000004df54c in bnio_detach (sio=0xc3da70) at siobuf.c:148
#7  0x00000000004d6137 in imap_handle_disconnect (h=0xb79000)
    at imap-handle.c:558
#8  0x00000000004d6b17 in imap_timeout_cb (arg=0xb79000) at imap-handle.c:735
#9  0x00000000004dea3b in sio_sslpoll (sio=0xc3da70, ret=<value optimized out>)
    at siobuf.c:341
#10 0x00000000004deb0a in raw_read (sio=0xc3da70) at siobuf.c:522
#11 bnio_fill (sio=0xc3da70) at siobuf.c:560
#12 0x00000000004dee26 in bnio_read (sio=0x17, bufp=<value optimized out>,
    buflen=37) at siobuf.c:592
#13 0x00000000004dee53 in bnio_getc (sio=0x17) at siobuf.c:618
#14 0x00000000004d6331 in imap_cmd_get_tag (handle=0xb79000, lastcmd=388)
    at imap-handle.c:885
#15 imap_cmd_step (handle=0xb79000, lastcmd=388) at imap-handle.c:2002
#16 0x00000000004d6c8c in imap_cmd_exec_cmdno (handle=0xb79000,
    cmd=0xfb9080 "LIST \"Trash\" \"%\"", ret_cmdno=0x0) at imap-handle.c:2087
#17 0x00000000004d16d9 in imap_mbox_list (handle=0xb79000,
    what=<value optimized out>) at imap-commands.c:326
#18 0x00000000004abc77 in lbm_imap_check (mailbox=0xa827e0)
    at mailbox_imap.c:1246
#19 libbalsa_mailbox_imap_check (mailbox=0xa827e0) at mailbox_imap.c:1262
#20 0x00000000004a3d9e in libbalsa_mailbox_check (mailbox=0xa827e0)
    at mailbox.c:719
#21 0x000000000045695f in bw_mailbox_check (mailbox=0xa827e0)
    at main-window.c:2951
#22 0x00007fffef32ea4d in g_slist_foreach () from /usr/lib/libglib-2.0.so.0
#23 0x0000000000456787 in bw_check_messages_thread (list=0xf26e00)
    at main-window.c:2969
#24 0x00007ffff3d1df9a in start_thread () from /lib/libpthread.so.0
#25 0x00007fffee9df56d in clone () from /lib/libc.so.6
#26 0x0000000000000000 in ?? ()

Thread 1 (Thread 0x7ffff7e987f0 (LWP 7029)):
#0  0x00007fffee9d6d36 in poll () from /lib/libc.so.6
#1  0x00007fffef313839 in ?? () from /usr/lib/libglib-2.0.so.0
#2  0x00007fffef313e3d in g_main_loop_run () from /usr/lib/libglib-2.0.so.0
#3  0x00007ffff14e3b97 in gtk_main () from /usr/lib/libgtk-x11-2.0.so.0
#4  0x000000000045bf05 in main (argc=<value optimized out>,
    argv=0x7fffffffe498) at main.c:1149
(gdb)




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Re: [Annoyance] Thread still present after leaving balsa

by Peter Bloomfield :: Rate this Message:

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On 08/01/2009 01:03:25 PM Sat, Pawel Salek wrote:
[ snip ]
> This is the (in)fameous xcb deadlock problem - or can it be a heap  
> corruption? One way to find out is to run either:
>
> env MALLOC_CHECK_=2 balsa
> or using valgrind.

I've been seeing these too.  Running with MALLOC_CHECK_=2 reveals no  
errors before the segv, so it doesn't appear to be misuse of the heap.  
The segv is typically in code like:

(gdb) l
4306        malloc_consolidate(av);
4307      else {
4308        bck = victim->bk;
4309        set_inuse_bit_at_offset(victim, nb);
4310        bin->bk = bck;
4311        bck->fd = bin;
4312
4313        if (av != &main_arena)
4314  victim->size |= NON_MAIN_ARENA;
4315        check_malloced_chunk(av, victim, nb);

and in line 4311, bck is NULL.  So victim is corrupt, which looks like a  
glibc bug.

But...running with valgrind always quits shortly after the main window is  
displayed, with

Assertion 'pthread_mutex_unlock(&m->mutex) == 0' failed at  
pulsecore/mutex-posix.c:108, function pa_mutex_unlock(). Aborting.

Comments on a bug (can't find it today!) suggested exporting  
CANBERRA_SERVER=NULL, which does indeed allow valgrind balsa to run, but  
also revealing no memory allocation issues.

After exporting that, however, I can no longer reproduce the segv!  That  
suggests that something in the sound stack may be corrupting the heap, in  
some way that's not detected by MALLOC_CHECK_.  Anyway, for me, so far,  
that's providing a work-around.

Best,

Peter


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