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BioPerl
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Officially organized in 1995 and existing informally for several years prior, The Bioperl Project is an international association of developers of open source Perl tools for bioinformatics, genomics and life science research. BioPerl home is here.
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  • Perl - Bioperl-L: (10/10)
    Perl - Bioperl-L
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Thread (3846 Threads) Rating Replies Last Message Child Forum

modify sequence names by yang liu-8
4
by Florent Angly

Bio::Seq->subseq documentation by Jim Hu
2
by Jim Hu

Writing bp_grep by Carnë Draug-2
6
by Carnë Draug-2

small project by Jason Stajich-5
1
by L.M. Timmermans

BioPerl BuildBot by Peter Cock
5
by Fields, Christopher ...

Bio::SeqIO::tab deletes gap characters when reading sequences, which is inconvenient by Tim White-7
1
by Fields, Christopher ...

(no subject) by Hermann Norpois
1
by prateek singh yadav

Codon boostraping by Tristan Lefebure-2
1
by Jason Stajich-5

bioperl 1.6. and Perl API by Hermann Norpois
1
by Fields, Christopher ...

hmmer3 to hmmer2 by Thomas, Dallas
1
by Fields, Christopher ...

illustrating get_Seqfeatures vs get_all_SeqFeatures by Jim Hu
1
by Jason Stajich-5

some contigs do not work for sequence retrievel by Hermann Norpois
1
by Hotz, Hans-Rudolf-2

codon usage by subarna thakur
7
by Jim Hu

next_seq problem by Hermann Norpois
0
by Hermann Norpois

Gbrowse file uploads, bigwig and chromosome sizes files by Jim Hu
1
by Scott Cain-4

Count read depths at specific loci w/Bio::DB::Sam by Mark Aquino
1
by Scott Cain-4

piping values into an existing GENBANK file by Alavi, Mohammadali (...
1
by Jason Stajich-5

genomic coordinates always on the plus strand by Hermann Norpois
2
by Surya Saha

Teaching with BioPerl this summer by Jim Hu
4
by Smithies, Russell

get geneID for gene names by Hermann Norpois
6
by Smithies, Russell

Abot prot_param code :) by guillermo romero-2
2
by Joel Martin

Bioperl for global alignment by prasad ms-2
2
by Frank Schwach

[GMOD-devel] GMOD 2013 meeting location survey by Scott Cain-4
0
by Scott Cain-4

doubt withc protparam.pm by David Efrain Garcia ...
0
by David Efrain Garcia ...

About bioperl global alignment by Prasad ms
1
by Frank Schwach

to retrieve Upstream and downstream genes -Reg by tarakaramji M
1
by Carnë Draug-2

Circular dependency problems packaging BioPerl as RPM by Guest, Simon
2
by Guest, Simon

unblessed reference on sam->pileup by Mark Aquino
0
by Mark Aquino

unblessed reference in $sam->pileup error. by Mark Aquino
0
by Mark Aquino

Retrieving promoter sequenc by Hermann Norpois
0
by Hermann Norpois

different interpretion of get_seq_by_id by DB::GenBank and DB:Entrez::Gene by Hermann Norpois
0
by Hermann Norpois

Announcing OBF Google Summer of Code Accepted Students by Robert Buels-2
0
by Robert Buels-2

Problems installing BioPerl & cpan by Merche Castillo
6
by Fields, Christopher ...

configuration problem with Bio::Tools::Run::Alignment::ClustalW by Huansheng Xu
0
by Huansheng Xu

Transcriptional Regulatory Element Database by Hermann Norpois
1
by Jason Stajich-5
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