How can I get missing methods in sonar that I don't get in the regular maven build?

I've set my standard hudson job for my project to run Sonar every time.

The main maven build ran clean. No errors.

The subsequent sonar processing got failures from undefined methods:
as if the sonar run of surefire somehow ended up with a mixture of old
and new code.

I don't know where to start diagnosing this. Help?

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