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Query regarding backend MySQL database of Gbrowse

by niharika sharma :: Rate this Message:

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Hello,

I have installed and am using Gbrowse for building an application for our lab. I have installed MySQL and using Gbrowse tutorial have carried out following steps successfully.

C:\Windows> ppm
ppm> install DBD::mysql
ppm> quit

% mysql -uroot -p
Enter password: *********

mysql> create database rice;
Query OK, 1 row affected (0.04 sec)

mysql> grant all privileges on rice.* to ODBC@localhost;
Query OK, 0 rows affected (0.00 sec)

mysql> grant select on rice.* to nobody@localhost;
Query OK, 0 rows affected (0.00 sec)

mysql> quit
Bye

% bp_seqfeature_load.pl -c -f -d rice rice_all.gff3
loading rice_all.fa...

Building object tree... 0.00s
Loading bulk data into database... 0.00s
load time: 0.02s
loading rice_all.gff3...

Building object tree... 0.00s
Loading bulk data into database... 0.02s


After loading bulk data command it gives an error which I am attaching with
the mail.Kindly go through it and let me know why this error comes and
how I would be able to load the entire data successfully into my
backend database of MySQL.

Awaiting for response.



Regards,

Niharika Sharma.
M.Phil Plant molecular Biology student.




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