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Re: Gbrowse 2 installation in CentOS 5

by Miquel Ramia :: Rate this Message:

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Hi,

I'm trying to install GBrowse2 in CentOS5 (running Gbrowse 1.69 with no
problems), but I tried CPAN and manually downloading the package, and
allways get the same error in ./Build test, The process "crash" in:

t/03.render.t ............. 114/138

(sometimes 112, sometimes 118) but it stops completely.

Anyone with the same problem?

I'll try installing GBrowse2 in another computer as well

Scott Cain wrote:

> Hi Bala,
>
> Since GBrowse2 is still in development, there are no RPMs for it, so I
> don't see how you could use yum to install it. Additionally, since
> Bio::Graphics is under active development, RPM production for it is
> typically going to lag behind (in fact, I'd be surprised if Allen and
> Brian made an RPM for it yet at all).  At best, you could get many of
> the prereqs with yum.  Also, I don't know what you mean when you write
> you cannot install GMOD: do you mean GBrowse?
>
> What I would try for installing GBrowse is to use the cpan shell
> (after you use yum to install gd-dev/libgd):
>
>   sudo cpan
>   cpan> install LDS/GBrowse-1.994.tar.gz
>
> Scott
>
>
>
> On Thu, Jun 4, 2009 at 7:58 AM, Selvaraj, Balamuruganand (B)
> <BSelvaraj@...> wrote:
>  
>> Hi GMOD users,
>>
>> With installation of Gbrowse 2 not possible with windows, I am trying to
>> install it in CentOS 5 using the Biopackages.net.
>>
>> However, I am facing issues with yum as it cannnot install Bio::Graphics or
>> GMOD.
>>
>> Has anyone  tried to install Gbrowse 2 using yum in CentOS 5.
>>
>> Thanks for your reply
>>
>> -Bala
>>
>> ------------------------------------------------------------------------------
>> OpenSolaris 2009.06 is a cutting edge operating system for enterprises
>> looking to deploy the next generation of Solaris that includes the latest
>> innovations from Sun and the OpenSource community. Download a copy and
>> enjoy capabilities such as Networking, Storage and Virtualization.
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>>
>>    
>
>
>
>  


------------------------------------------------------------------------------
OpenSolaris 2009.06 is a cutting edge operating system for enterprises
looking to deploy the next generation of Solaris that includes the latest
innovations from Sun and the OpenSource community. Download a copy and
enjoy capabilities such as Networking, Storage and Virtualization.
Go to: http://p.sf.net/sfu/opensolaris-get
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