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Re: How to Downgrade GBrowse

by Scott Cain-4 :: Rate this Message:

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No, the cgi scripts would remain, as would the configuration files.

Scott


On Mon, Jun 8, 2009 at 3:16 PM, Ajendrex<ajendrex@...> wrote:

>
> Hi Scott!
>
> Thank you for your quick answer.  I have only one question more, Do the
> GBrowse 1.69 installation actually remove GBrowse 1.993?
>
> Anyway, I'm going to install GBrowse 1.69 and figure it out :P
>
>
> Scott Cain-4 wrote:
>>
>> Hi,
>>
>> All of the prereqs should be safe--Bio::Graphics and BioPerl can stay
>> as is.  To install GBrowse 1.69, you can download the source and do
>> "perl Makefile.PL; make, sudo make install UNINST=1".  That UNINST=1
>> part is important, as it will remove the perl libraries that are
>> specific to GBrowse2.  You can do the same thing with an anonymous
>> checkout of the cvs "stable" branch, which is what will be the 1.70
>> release soon.
>>
>> Scott
>>
>>
>> On Mon, Jun 8, 2009 at 2:57 PM, Ajendrex<ajendrex@...> wrote:
>>>
>>> Hello,
>>>
>>> Is there any way to safely downgrade GBrowse? I have GBrowse installed,
>>> version 1.993, but it is not working well (not showing "overview"
>>> neither "Details", plus errors like "The landmark named
>>> chrI:80,000..120,000 is not recognized. See the help pages for
>>> suggestions" just after installation), so I want to perform a GBrowse
>>> downgrade (to version 1.69, the one I understand is more stable). Could
>>> anyone tell me how to do this?
>>>
>>> Basically, I want to know how to UNINSTALL GBrowse :) which I installed
>>> with CPAN (as far as I know, cpan does not have an "uninstall"
>>> instruction).
>>>
>>> Thanks!
>>> --
>>> View this message in context:
>>> http://www.nabble.com/How-to-Downgrade-GBrowse-tp23930030p23930030.html
>>> Sent from the gmod-gbrowse mailing list archive at Nabble.com.
>>>
>>>
>>> ------------------------------------------------------------------------------
>>> Crystal Reports - New Free Runtime and 30 Day Trial
>>> Check out the new simplified licensing option that enables unlimited
>>> royalty-free distribution of the report engine for externally facing
>>> server and web deployment.
>>> http://p.sf.net/sfu/businessobjects
>>> _______________________________________________
>>> Gmod-gbrowse mailing list
>>> Gmod-gbrowse@...
>>> https://lists.sourceforge.net/lists/listinfo/gmod-gbrowse
>>>
>>
>>
>>
>> --
>> ------------------------------------------------------------------------
>> Scott Cain, Ph. D.                                   scott at scottcain
>> dot net
>> GMOD Coordinator (http://gmod.org/)                     216-392-3087
>> Ontario Institute for Cancer Research
>>
>> ------------------------------------------------------------------------------
>> Crystal Reports - New Free Runtime and 30 Day Trial
>> Check out the new simplified licensing option that enables unlimited
>> royalty-free distribution of the report engine for externally facing
>> server and web deployment.
>> http://p.sf.net/sfu/businessobjects
>> _______________________________________________
>> Gmod-gbrowse mailing list
>> Gmod-gbrowse@...
>> https://lists.sourceforge.net/lists/listinfo/gmod-gbrowse
>>
>>
>
> --
> View this message in context: http://www.nabble.com/How-to-Downgrade-GBrowse-tp23930030p23930366.html
> Sent from the gmod-gbrowse mailing list archive at Nabble.com.
>
>
> ------------------------------------------------------------------------------
> Crystal Reports - New Free Runtime and 30 Day Trial
> Check out the new simplified licensing option that enables unlimited
> royalty-free distribution of the report engine for externally facing
> server and web deployment.
> http://p.sf.net/sfu/businessobjects
> _______________________________________________
> Gmod-gbrowse mailing list
> Gmod-gbrowse@...
> https://lists.sourceforge.net/lists/listinfo/gmod-gbrowse
>



--
------------------------------------------------------------------------
Scott Cain, Ph. D.                                   scott at scottcain dot net
GMOD Coordinator (http://gmod.org/)                     216-392-3087
Ontario Institute for Cancer Research

------------------------------------------------------------------------------
Crystal Reports - New Free Runtime and 30 Day Trial
Check out the new simplified licensing option that enables unlimited
royalty-free distribution of the report engine for externally facing
server and web deployment.
http://p.sf.net/sfu/businessobjects
_______________________________________________
Gmod-gbrowse mailing list
Gmod-gbrowse@...
https://lists.sourceforge.net/lists/listinfo/gmod-gbrowse

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