Re: Server error upon Gbrowse2 upgrade

Hi Joe,

I am also getting the same error. Scott asked me to disable SELinux.
But it is already disabled in my server.

I am also not sure how to get rid of this.
If you come across anything let me know.

Thanks
~Bala


-----Original Message-----
From: joseph franklin [mailto:joseph.franklin@...]
Sent: Friday, June 05, 2009 10:33 AM
To: gmod-gbrowse@...
Subject: [Gmod-gbrowse] Server error upon Gbrowse2 upgrade

Hi,

I upgraded from GBrowse-1.993 to GBrowse-1.994 using CPAN in Ubuntu  
9.04.  These upgrades usually work great, but this time I can't load  
the browser, and I get apache errors:
[Fri Jun 05 10:11:48 2009] [error] [client xx] (13)Permission denied:  
exec of '/usr/lib/cgi-bin/gb2/gbrowse' failed
[Fri Jun 05 10:11:48 2009] [error] [client xx] Premature end of script  
headers: gbrowse

The file permissions for the cgibin/gb2 directory are:
-r--r--r-- 1 root root  1119 2009-02-10 07:09 gbgff
-r--r--r-- 1 root root   515 2009-06-04 21:59 gbrowse
-r--r--r-- 1 root root 17923 2009-06-04 21:59 gbrowse_details
-r--r--r-- 1 root root 21468 2009-06-04 21:59 gbrowse_gmap
-r--r--r-- 1 root root 20808 2009-06-04 21:59 gbrowse_img

I ran the Bio::Graphics::Browser Build reconfig with all defaults,  
which tested and installed fine--but still the errors.

Thanks for any help with this.

-Joe


________________________________
Joe Franklin
Department of Cell Biology
Yale University School of Medicine
295 Congress Ave, BCMM 137
New Haven, CT 06519
USA

joseph.franklin@...
407 341 3263 (cell)
203 654 7494 (google voice)


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------------------------------------------------------------------------------
OpenSolaris 2009.06 is a cutting edge operating system for enterprises
looking to deploy the next generation of Solaris that includes the latest
innovations from Sun and the OpenSource community. Download a copy and
enjoy capabilities such as Networking, Storage and Virtualization.
Go to: http://p.sf.net/sfu/opensolaris-get
_______________________________________________
Gmod-gbrowse mailing list
Gmod-gbrowse@...
https://lists.sourceforge.net/lists/listinfo/gmod-gbrowse