Captainrave wrote:
> #!/bin/perl
> my $file = shift; # get the file name, somehow
>
> The file is on the same folder. But how do I tell it to use this file?
http://stein.cshl.org/genome_informatics/perl_intro/command_line.htmlBasically, when you run your script add the name of the file to your
command line.
me% perl myscript.pl myfile
By saying 'my $file = shift' inside myscript.pl, the variable $file now
contains the filename 'myfile'.
You could also have hardcoded the filename:
my $file = 'myfile';
Anyway, you're going to run into lots of these issues, and they're
beyond the scope of this mailing list. For basic perl problems seek help
via www.perl.org. When you have a BioPerl-specific question, don't
hesitate to post here.
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