nice tool employing CDK
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nice tool employing CDK
by Rajarshi Guha-4
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http://www.nature.com/nchembio/journal/vaop/ncurrent/suppinfo/nchembio.187_S1.html
-- Rajarshi Guha ------------------------------------------------------------------------------ Enter the BlackBerry Developer Challenge This is your chance to win up to $100,000 in prizes! For a limited time, vendors submitting new applications to BlackBerry App World(TM) will have the opportunity to enter the BlackBerry Developer Challenge. See full prize details at: http://p.sf.net/sfu/Challenge _______________________________________________ Cdk-user mailing list Cdk-user@... https://lists.sourceforge.net/lists/listinfo/cdk-user |
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Re: nice tool employing CDK
by baoilleach
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Shurely there's some mistake. There's no reference to the CDK in the article.
2009/7/8 Rajarshi Guha <rajarshi.guha@...>: > http://www.nature.com/nchembio/journal/vaop/ncurrent/suppinfo/nchembio.187_S1.html > > -- > Rajarshi Guha > > ------------------------------------------------------------------------------ > Enter the BlackBerry Developer Challenge > This is your chance to win up to $100,000 in prizes! For a limited time, > vendors submitting new applications to BlackBerry App World(TM) will have > the opportunity to enter the BlackBerry Developer Challenge. See full prize > details at: http://p.sf.net/sfu/Challenge > _______________________________________________ > Cdk-user mailing list > Cdk-user@... > https://lists.sourceforge.net/lists/listinfo/cdk-user > > ------------------------------------------------------------------------------ Enter the BlackBerry Developer Challenge This is your chance to win up to $100,000 in prizes! For a limited time, vendors submitting new applications to BlackBerry App World(TM) will have the opportunity to enter the BlackBerry Developer Challenge. See full prize details at: http://p.sf.net/sfu/Challenge _______________________________________________ Cdk-user mailing list Cdk-user@... https://lists.sourceforge.net/lists/listinfo/cdk-user |
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Re: nice tool employing CDK
by Egon Willighagen-5
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On Wed, Jul 8, 2009 at 5:01 PM, Noel O'Boyle<baoilleach@...> wrote:
> Shurely there's some mistake. There's no reference to the CDK in the article. Yes, I'm noting that too... I'm now looking at the source code... Egon -- Post-doc @ Uppsala University http://chem-bla-ics.blogspot.com/ ------------------------------------------------------------------------------ Enter the BlackBerry Developer Challenge This is your chance to win up to $100,000 in prizes! For a limited time, vendors submitting new applications to BlackBerry App World(TM) will have the opportunity to enter the BlackBerry Developer Challenge. See full prize details at: http://p.sf.net/sfu/Challenge _______________________________________________ Cdk-user mailing list Cdk-user@... https://lists.sourceforge.net/lists/listinfo/cdk-user |
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Re: nice tool employing CDK
by Egon Willighagen-5
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On Wed, Jul 8, 2009 at 5:13 PM, Egon
Willighagen<egon.willighagen@...> wrote: > On Wed, Jul 8, 2009 at 5:01 PM, Noel O'Boyle<baoilleach@...> wrote: >> Shurely there's some mistake. There's no reference to the CDK in the article. > > Yes, I'm noting that too... I'm now looking at the source code... Which is not there, not as file download either... Rajarshi, please elaborate and tell us what you know more about this... Egon -- Post-doc @ Uppsala University http://chem-bla-ics.blogspot.com/ ------------------------------------------------------------------------------ Enter the BlackBerry Developer Challenge This is your chance to win up to $100,000 in prizes! For a limited time, vendors submitting new applications to BlackBerry App World(TM) will have the opportunity to enter the BlackBerry Developer Challenge. See full prize details at: http://p.sf.net/sfu/Challenge _______________________________________________ Cdk-user mailing list Cdk-user@... https://lists.sourceforge.net/lists/listinfo/cdk-user |
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Re: nice tool employing CDK
by Rajarshi Guha-4
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On Wed, Jul 8, 2009 at 11:01 AM, Noel O'Boyle <baoilleach@...> wrote: Shurely there's some mistake. There's no reference to the CDK in the article. Yes, unfortunately no citation. But if you look in the jar files, the CDK is there -- Rajarshi Guha ------------------------------------------------------------------------------ Enter the BlackBerry Developer Challenge This is your chance to win up to $100,000 in prizes! For a limited time, vendors submitting new applications to BlackBerry App World(TM) will have the opportunity to enter the BlackBerry Developer Challenge. See full prize details at: http://p.sf.net/sfu/Challenge _______________________________________________ Cdk-user mailing list Cdk-user@... https://lists.sourceforge.net/lists/listinfo/cdk-user |
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Re: nice tool employing CDK
by Rajarshi Guha-4
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On Wed, Jul 8, 2009 at 11:15 AM, Egon Willighagen <egon.willighagen@...> wrote:
Yes, there's no source code yet (the main web site is still under development). I expect it will be there since the article indicates that they have released the tool under the GPL (that leads to another issue - can CDK be included in a GPL tool?) But if you look at the jar file contained in http://www.nature.com/nchembio/journal/vaop/ncurrent/extref/nchembio.187-S4.zip you can see CDK classes -- Rajarshi Guha ------------------------------------------------------------------------------ Enter the BlackBerry Developer Challenge This is your chance to win up to $100,000 in prizes! For a limited time, vendors submitting new applications to BlackBerry App World(TM) will have the opportunity to enter the BlackBerry Developer Challenge. See full prize details at: http://p.sf.net/sfu/Challenge _______________________________________________ Cdk-user mailing list Cdk-user@... https://lists.sourceforge.net/lists/listinfo/cdk-user |
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Re: nice tool employing CDK
by Egon Willighagen-5
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On Wed, Jul 8, 2009 at 5:15 PM, Rajarshi Guha<rajarshi.guha@...> wrote:
> On Wed, Jul 8, 2009 at 11:01 AM, Noel O'Boyle <baoilleach@...> wrote: > Yes, unfortunately no citation. But if you look in the jar files, the CDK > is there Why did they not cite the CDK?? We're not even in the acknowledgements... :( Egon -- Post-doc @ Uppsala University http://chem-bla-ics.blogspot.com/ ------------------------------------------------------------------------------ Enter the BlackBerry Developer Challenge This is your chance to win up to $100,000 in prizes! For a limited time, vendors submitting new applications to BlackBerry App World(TM) will have the opportunity to enter the BlackBerry Developer Challenge. See full prize details at: http://p.sf.net/sfu/Challenge _______________________________________________ Cdk-user mailing list Cdk-user@... https://lists.sourceforge.net/lists/listinfo/cdk-user |
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Re: nice tool employing CDK
by Egon Willighagen-5
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On Wed, Jul 8, 2009 at 5:17 PM, Rajarshi Guha<rajarshi.guha@...> wrote:
>> Rajarshi, please elaborate and tell us what you know more about this... > > Yes, there's no source code yet (the main web site is still under > development). I expect it will be there since the article indicates that > they have released the tool under the GPL (that leads to another issue - can > CDK be included in a GPL tool?) Yes, the LGPL 2.1 (used by the CDK) is compatible with GPL 3. See: http://gplv3.fsf.org/dd3-faq > But if you look at the jar file contained in > http://www.nature.com/nchembio/journal/vaop/ncurrent/extref/nchembio.187-S4.zip > you can see CDK classes Yes, found it... it's in the ScaffoldTreeGenerator.jar... Egon -- Post-doc @ Uppsala University http://chem-bla-ics.blogspot.com/ ------------------------------------------------------------------------------ Enter the BlackBerry Developer Challenge This is your chance to win up to $100,000 in prizes! For a limited time, vendors submitting new applications to BlackBerry App World(TM) will have the opportunity to enter the BlackBerry Developer Challenge. See full prize details at: http://p.sf.net/sfu/Challenge _______________________________________________ Cdk-user mailing list Cdk-user@... https://lists.sourceforge.net/lists/listinfo/cdk-user |
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Re: nice tool employing CDK
by gilleain torrance
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Perhaps the cdk developers could write a paper titled "Projects That
Use The CDK", at least that way the link between them would be established :) gilleain On Wed, Jul 8, 2009 at 4:25 PM, Egon Willighagen<egon.willighagen@...> wrote: > On Wed, Jul 8, 2009 at 5:17 PM, Rajarshi Guha<rajarshi.guha@...> wrote: >>> Rajarshi, please elaborate and tell us what you know more about this... >> >> Yes, there's no source code yet (the main web site is still under >> development). I expect it will be there since the article indicates that >> they have released the tool under the GPL (that leads to another issue - can >> CDK be included in a GPL tool?) > > Yes, the LGPL 2.1 (used by the CDK) is compatible with GPL 3. See: > > http://gplv3.fsf.org/dd3-faq > >> But if you look at the jar file contained in >> http://www.nature.com/nchembio/journal/vaop/ncurrent/extref/nchembio.187-S4.zip >> you can see CDK classes > > Yes, found it... it's in the ScaffoldTreeGenerator.jar... > > Egon > > -- > Post-doc @ Uppsala University > http://chem-bla-ics.blogspot.com/ > > ------------------------------------------------------------------------------ > Enter the BlackBerry Developer Challenge > This is your chance to win up to $100,000 in prizes! For a limited time, > vendors submitting new applications to BlackBerry App World(TM) will have > the opportunity to enter the BlackBerry Developer Challenge. See full prize > details at: http://p.sf.net/sfu/Challenge > _______________________________________________ > Cdk-user mailing list > Cdk-user@... > https://lists.sourceforge.net/lists/listinfo/cdk-user > ------------------------------------------------------------------------------ Enter the BlackBerry Developer Challenge This is your chance to win up to $100,000 in prizes! For a limited time, vendors submitting new applications to BlackBerry App World(TM) will have the opportunity to enter the BlackBerry Developer Challenge. See full prize details at: http://p.sf.net/sfu/Challenge _______________________________________________ Cdk-user mailing list Cdk-user@... https://lists.sourceforge.net/lists/listinfo/cdk-user |
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Re: nice tool employing CDK
by Egon Willighagen-5
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On Wed, Jul 8, 2009 at 3:38 PM, Rajarshi Guha<rajarshi.guha@...> wrote:
> http://www.nature.com/nchembio/journal/vaop/ncurrent/suppinfo/nchembio.187_S1.html One would almost forget: Congrats to the Stefan Wentzel and the co-authors for this interesting paper! Really looking forward to mining the source code to see how the CDK is used in this work! Egon -- Post-doc @ Uppsala University http://chem-bla-ics.blogspot.com/ ------------------------------------------------------------------------------ Enter the BlackBerry Developer Challenge This is your chance to win up to $100,000 in prizes! For a limited time, vendors submitting new applications to BlackBerry App World(TM) will have the opportunity to enter the BlackBerry Developer Challenge. See full prize details at: http://p.sf.net/sfu/Challenge _______________________________________________ Cdk-user mailing list Cdk-user@... https://lists.sourceforge.net/lists/listinfo/cdk-user |
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