settings in config for proper display of tracks

[ankita narang]

Hi Sir ,

I need to host my browser outside LAN , but the problem is that on my system , gbrowse tracks are in proper order as i check outside my system (across LAN ), things become worse , tracks are totally out of order , what changes i should make to look as good as its in my system. please help soon.

------------------------------------------------------------------------------
OpenSolaris 2009.06 is a cutting edge operating system for enterprises
looking to deploy the next generation of Solaris that includes the latest
innovations from Sun and the OpenSource community. Download a copy and
enjoy capabilities such as Networking, Storage and Virtualization.
Go to: http://p.sf.net/sfu/opensolaris-get
_______________________________________________
Gmod-gbrowse mailing list
Gmod-gbrowse@...
https://lists.sourceforge.net/lists/listinfo/gmod-gbrowse

[Sheldon McKay-3]

Hi Ankita,

Which version of Gbrowse are you using?  Do you mean you are checking your gbrowse server from other computers?  If you have dragged the tracks to appear in a particular order, this information is stored in a session specific to your browser and computer.  If you use the 'bookmark this' link near the top of the page, all of your track positions, etc can be reproduced by saving the complete URL query string, which contains the session ID and other display options.

Sheldon

On Fri, Jun 5, 2009 at 9:34 AM, ankita narang <ankita.bioinfo77@...> wrote:

Hi Sir ,

I need to host my browser outside LAN , but the problem is that on my system , gbrowse tracks are in proper order as i check outside my system (across LAN ), things become worse , tracks are totally out of order , what changes i should make to look as good as its in my system. please help soon.

--
Sheldon McKay, PhD
Cold Spring Harbor Laboratory
Office/Mobile:  [phone]

Sent from Iowa City, Iowa, United States
------------------------------------------------------------------------------
OpenSolaris 2009.06 is a cutting edge operating system for enterprises
looking to deploy the next generation of Solaris that includes the latest
innovations from Sun and the OpenSource community. Download a copy and
enjoy capabilities such as Networking, Storage and Virtualization.
Go to: http://p.sf.net/sfu/opensolaris-get
_______________________________________________
Gmod-gbrowse mailing list
Gmod-gbrowse@...
https://lists.sourceforge.net/lists/listinfo/gmod-gbrowse

[Sheldon McKay-3]

Hi Ankita,

Please always CC the list so other can benefit from these threads. 
Your feedback is quite vague and makes it hard to work out what your problem is.  If I understand correctly "on system" means your own computer and someone else has installed gbrowse on a diffrent server and the two do not look the same.   If this is the case, you can't control how the other gbrowse is configured but you can tweak your own installation using the options described here:
http://gmod.org/wiki/GBrowse_Configuration_HOWTO
and by going through the tutorial:
http://gmod.cvs.sourceforge.net/*checkout*/gmod/Generic-Genome-Browser/docs/tutorial/tutorial.html?pathrev=stable

Sheldon

On Fri, Jun 5, 2009 at 9:50 AM, ankita narang <ankita.bioinfo77@...> wrote:

Hi ,

I am using v1.69 on system and on server its already installed by somebody else , then whats the to check version , if i am not worng it can be check at the end of Gbrowse page.
should i have to make any changes in server settings also.... .

Ankita

On Fri, Jun 5, 2009 at 8:14 PM, Sheldon McKay <sheldon.mckay@...> wrote:

Hi Ankita,

Which version of Gbrowse are you using?  Do you mean you are checking your gbrowse server from other computers?  If you have dragged the tracks to appear in a particular order, this information is stored in a session specific to your browser and computer.  If you use the 'bookmark this' link near the top of the page, all of your track positions, etc can be reproduced by saving the complete URL query string, which contains the session ID and other display options.

Sheldon

On Fri, Jun 5, 2009 at 9:34 AM, ankita narang <ankita.bioinfo77@...> wrote:

Hi Sir ,

I need to host my browser outside LAN , but the problem is that on my system , gbrowse tracks are in proper order as i check outside my system (across LAN ), things become worse , tracks are totally out of order , what changes i should make to look as good as its in my system. please help soon.

--
Sheldon McKay, PhD
Cold Spring Harbor Laboratory
Office/Mobile:  [phone]

Sent from Iowa City, Iowa, United States

--
Sheldon McKay, PhD
Cold Spring Harbor Laboratory
Office/Mobile:  [phone]

Sent from Iowa City, Iowa, United States
------------------------------------------------------------------------------
OpenSolaris 2009.06 is a cutting edge operating system for enterprises
looking to deploy the next generation of Solaris that includes the latest
innovations from Sun and the OpenSource community. Download a copy and
enjoy capabilities such as Networking, Storage and Virtualization.
Go to: http://p.sf.net/sfu/opensolaris-get
_______________________________________________
Gmod-gbrowse mailing list
Gmod-gbrowse@...
https://lists.sourceforge.net/lists/listinfo/gmod-gbrowse

[ankita narang]

Hi,

This time i did CC , sorry i made this mistake several times , i know threads are very useful , i will take care of this in future. yes i mean to say that my computer has 1.69 but i dont know about sever's Gbrowse version , i also bookmark the page and copied it to server's url bar , it worked same as on my computer , but i am using same config files for both my own computer and server , i am not getting exactly where i have to make changes , either server setting need changes as config files dont in my opinon , as i am using same for both.

Ankita

On Fri, Jun 5, 2009 at 8:29 PM, Sheldon McKay <sheldon.mckay@...> wrote:

Hi Ankita,

Please always CC the list so other can benefit from these threads. 
Your feedback is quite vague and makes it hard to work out what your problem is.  If I understand correctly "on system" means your own computer and someone else has installed gbrowse on a diffrent server and the two do not look the same.   If this is the case, you can't control how the other gbrowse is configured but you can tweak your own installation using the options described here:
http://gmod.org/wiki/GBrowse_Configuration_HOWTO
and by going through the tutorial:
http://gmod.cvs.sourceforge.net/*checkout*/gmod/Generic-Genome-Browser/docs/tutorial/tutorial.html?pathrev=stable

Sheldon

On Fri, Jun 5, 2009 at 9:50 AM, ankita narang <ankita.bioinfo77@...> wrote:

Hi ,

I am using v1.69 on system and on server its already installed by somebody else , then whats the to check version , if i am not worng it can be check at the end of Gbrowse page.
should i have to make any changes in server settings also.... .

Ankita

On Fri, Jun 5, 2009 at 8:14 PM, Sheldon McKay <sheldon.mckay@...> wrote:

Hi Ankita,

Which version of Gbrowse are you using?  Do you mean you are checking your gbrowse server from other computers?  If you have dragged the tracks to appear in a particular order, this information is stored in a session specific to your browser and computer.  If you use the 'bookmark this' link near the top of the page, all of your track positions, etc can be reproduced by saving the complete URL query string, which contains the session ID and other display options.

Sheldon

On Fri, Jun 5, 2009 at 9:34 AM, ankita narang <ankita.bioinfo77@...> wrote:

Hi Sir ,

I need to host my browser outside LAN , but the problem is that on my system , gbrowse tracks are in proper order as i check outside my system (across LAN ), things become worse , tracks are totally out of order , what changes i should make to look as good as its in my system. please help soon.

--
Sheldon McKay, PhD
Cold Spring Harbor Laboratory
Office/Mobile:  [phone]

Sent from Iowa City, Iowa, United States

--
Sheldon McKay, PhD
Cold Spring Harbor Laboratory
Office/Mobile:  [phone]

Sent from Iowa City, Iowa, United States

------------------------------------------------------------------------------
OpenSolaris 2009.06 is a cutting edge operating system for enterprises
looking to deploy the next generation of Solaris that includes the latest
innovations from Sun and the OpenSource community. Download a copy and
enjoy capabilities such as Networking, Storage and Virtualization.
Go to: http://p.sf.net/sfu/opensolaris-get
_______________________________________________
Gmod-gbrowse mailing list
Gmod-gbrowse@...
https://lists.sourceforge.net/lists/listinfo/gmod-gbrowse